BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E04LP1|AL428557
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1052 1736 0.0
>3x_Contig1052
Length = 4051
Score = 1736 bits (872), Expect = 0.0
Identities = 895/904 (99%), Gaps = 2/904 (0%)
Strand = Plus / Plus
Query: 1 atccgttctttagaaagaagttttccattagtgcatggacctttcagagtcatgggctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 atccgttctttagaaagaagttttccattagtgcatggacctttcagagtcatgggctcc 1630
Query: 61 attggtgatccaataagaattcaaaatccacaccatacgacaaacttaacgggaactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 attggtgatccaataagaattcaaaatccacaccatacgacaaacttaacgggaactttt 1690
Query: 121 caacagcatgaagatatatatgcagatcttatgaaacttagtgatattagctcgaaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 caacagcatgaagatatatatgcagatcttatgaaacttagtgatattagctcgaaatgt 1750
Query: 181 ttaccaggaaatgatcaagtgaggcggatgcttccaaagtcaatattcaatgtgaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 ttaccaggaaatgatcaagtgaggcggatgcttccaaagtcaatattcaatgtgaaagat 1810
Query: 241 ccaaaagattttgatgaatcaatgatcgacagtgtcaggttcgtcgcagtaagttcaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 ccaaaagattttgatgaatcaatgatcgacagtgtcaggttcgtcgcagtaagttcaggt 1870
Query: 301 agatcacattttcttgcgttggatgacaaaaatgatctttattcttgggatggtagagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1871 agatcacattttcttgcgttggatgacaaaaatgatctttattcttgggatggtagagag 1930
Query: 361 gtaaaccacggagtaaagctgatattcaatgatttaccaatgagaagtaccaatccaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 gtaaaccacggagtaaagctgatattcaatgatttaccaatgagaagtaccaatccaatt 1990
Query: 421 ttgaagataagttgcggttggaactgcaactgcatttttatatatggagtggggttagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 ttgaagataagttgcggttggaactgcaactgcatttttatatatggagtggggttagtc 2050
Query: 481 gtgtggaaatcaagggatacaactgtagggtttgatggatttgctaatgctcattacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 gtgtggaaatcaagggatacaactgtagggtttgatggatttgctaatgctcattacaaa 2110
Query: 541 gtaatttccaatacaggagaagtgaatggcgccaataaaatagtggactttgcgtgcgga 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 gtaattcccaatacaggagaagtgaatggcgccaataaaatagtggactttgcgtgcgga 2170
Query: 601 tccgataacgccgtctttwacattacaaatgagggtgaaaagctatggctatactcaaat 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2171 tccgataacgccgtcttttacattacaaatgagggtgaaaagctatggctatactcaaat 2230
Query: 661 gagatagagaagtacatagatttacctattgagggaaaaatggtaaaggttcaggcgtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2231 gagatagagaagtacatagatttacctattgagggaaaaatggtaaaggttcaggcgtct 2290
Query: 721 aataacacattagcaatattcacaagtgatacatgctataccgtggaaattaaagacagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2291 aataacacattagcaatattcacaagtgatacatgctataccgtggaaattaaagacagc 2350
Query: 781 gaagttgctcataacactttaaccaagattgaratcacaccawatgtgawadtcatctct 840
|||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||
Sbjct: 2351 gaagttgctcataacactttaaccaagattgaaatcacaccaaatgtgaaaatcatctct 2410
Query: 841 ttatcttttggtgacta-catggaa-tkcgttatcagacactggggacatgtacacatgg 898
||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 2411 ttatcttttggtgactaccatggaattgcgttatcagacactggggacatgtacacatgg 2470
Query: 899 ggat 902
||||
Sbjct: 2471 ggat 2474
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6611
Number of Sequences: 1807
Number of extensions: 6611
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)